BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002C11LP1|AL424942
(980 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1736 1894 0.0
>3x_Contig1736
Length = 21222
Score = 1894 bits (953), Expect = 0.0
Identities = 973/981 (99%), Gaps = 1/981 (0%)
Strand = Plus / Plus
Query: 1 gatcccttttgcaagatcggaggctgaaagttaatgaaggatgtcaaactctagagaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6128 gatcccttttgcaagatcggaggctgaaagttaatgaaggatgtcaaactctagagaacc 6187
Query: 61 atctgtttaacaaactactttcactatttgccgagtgattaacaagcatttttgcagctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6188 atctgtttaacaaactactttcactatttgccgagtgattaacaagcatttttgcagctt 6247
Query: 121 aatttcatagttggaactacgcttctatcaactgtatttgcgttagactttaagacatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6248 aatttcatagttggaactacgcttctatcaactgtatttgcgttagactttaagacatca 6307
Query: 181 tggcccttccaagtatgagtttttccgaatttgacgctttgatagagcagtgcaccaatg 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 6308 tggcccttccaagtatgagtgtttccgaatttgacgctttgatagagcagtgcaccaatg 6367
Query: 241 aaaagatacctaacggtgagatagacctatcggcagctttggagttatcagacatgataa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6368 aaaagatacctaacggtgagatagacctatcggcagctttggagttatcagacatgataa 6427
Query: 301 gatcgagaagacttcctccgaag-acgctatgagatgtttgaaaaagagggtgctacaga 359
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6428 gatcgagaagacttcctccgaaggacgctatgagatgtttgaaaaagagggtgctacaga 6487
Query: 360 ccaggaataaccaaaatttgcagttctccgtctggcgactagtagaagtttgcatgaaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6488 ccaggaataaccaaaatttgcagttctccgtctggcgactagtagaagtttgcatgaaga 6547
Query: 420 atggtggagttccctttttgaaagaggtttgctcacgagagtttatggactgcctcgagc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6548 atggtggagttccctttttgaaagaggtttgctcacgagagtttatggactgcctcgagc 6607
Query: 480 aagttatattggctgaatctacagactacgaattagaacagttttgtagtagattagtgg 539
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6608 aagtaatattggctgaatctacagactacgaattagaacagttttgtagtagattagtgg 6667
Query: 540 gggaattatatctggctttcaaaaatgactcgcaattaagctatgtagttaaggtatacc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6668 gggaattatatctggctttcaaaaatgactcgcaattaagctatgtagttaaggtatacc 6727
Query: 600 agaaattagtatccagaggtattgacatggagaatttgaaaccgacagaaaatttaaatg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6728 agaaattagtatccagaggtattgacatggagaatttgaaaccgacagaaaatttaaatg 6787
Query: 660 ctatgtttgatgcgaaaactcctgcggattggattgattccgatgcatgcatgatttgct 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6788 ctatgtttgatgcgaaaactcctgcggattggattgattccgatgcatgcatgatttgct 6847
Query: 720 ccacacaatttactttactcaacaggaaacatcattgtagatcatgtggtggtgtcttct 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6848 ccacacaatttactttactcaacaggaaacatcattgtagatcatgtggtggtgtcttct 6907
Query: 780 gccaacttcattcatcaaagttcattccattgcctgacttgggtattttcgagccagttc 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 6908 gccaacttcattcatcaaagttcattccattgcctgacttgggtattttcgagccagtgc 6967
Query: 840 gtktttgtgataactgttttgaagactacgatttgaaacgtaaatyaagcaaagggaaga 899
|| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 6968 gtgtttgtgataactgttttgaagactacgatttgaaacgtaaatcaagcaaagggaaga 7027
Query: 900 aatcgaaaggcmagaagagatttacacgttctgaggatgacgatgaggatctcagaagag 959
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7028 aatcgaaaggcaagaagagatttacacgttctgaggatgacgatgaggatctcagaagag 7087
Query: 960 ctatcgaactttctttkaagg 980
|||||||||||||||| ||||
Sbjct: 7088 ctatcgaactttctttgaagg 7108
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6696
Number of Sequences: 1807
Number of extensions: 6696
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 980
length of database: 10,358,551
effective HSP length: 16
effective length of query: 964
effective length of database: 10,329,639
effective search space: 9957771996
effective search space used: 9957771996
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)